Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
1WJW Chain:A ((59-99)) | ----------------------------------------------------------------------------------------------------------AFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAGG--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4574 for 219 contacts (-20.9/contact) +
2D Compatibility (PS) -4416 + (NN) -1589 + (LL) 15308
1D Compatibility (HY) -1600 + (ID) 50
Total energy: 3079.0 ( 14.06 by residue)
QMean score : 0.495
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