Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPIL-PLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYR-EQYDKILLYSGNMGQLQDMETLISFLKLNKD-QPQTLTILCGHGKKF-------ADVKTAIEDHRI-ENVKMFEF-------LTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDN------------------GDAHAIYNFINTH-SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 3OY2 Chain:A ((1-388)) | ---MKLIIVGAH-SSVPSGYGRVMRAIVPRISK-AHEVIVFGIHAFGRSVH-A-NIEE-FDAQTAEHVRGL--N------E----QGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRE---------N------LWWIFSHPKVVGVMAMSKCWISDICNYGCK---VPINIVSHFVDTKTIYDARKL----VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVA-SGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLC----SAEGAVLGKPLIISA--VGGADDYFSGD-CVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199220 for 2895 contacts (-68.8/contact) +
2D Compatibility (PS) -36006 + (NN) 759 + (LL) 2188
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -245629.0 ( -84.85 by residue)
QMean score : 0.383
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