Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
1Q90 Chain:R ((11-35))
KRNIMNLILAGGAGLPITTLALGYG------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11186 for 95 contacts (-117.7/contact) +
2D Compatibility (PS) -2537 + (NN) -831 + (LL) 10200
1D Compatibility (HY) 0 + (ID) 300
Total energy: -4654.0 ( -48.99 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: