Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT-
1Z4H Chain:A ((1-66))
MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVI--HGRARWLYRDHCEFKNKLLSRANG
General information:
TITO was launched using:
RESULT:
Template:
1Z4H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1406 for 418 contacts (-3.4/contact) +
2D Compatibility (PS) -6673 + (NN) 414 + (LL) 240
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -9425.0 ( -22.55 by residue)
QMean score : 0.169
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4H-query.scw
PDB file :
Tito_Scwrl_1Z4H.pdb
: