Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAKQFLTEADISIQLVKEVR--LVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL |
2DSF Chain:A ((89-140)) | ---------------------------------------------------------------TEGYLAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQ------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3188 for 201 contacts (-15.9/contact) +
2D Compatibility (PS) -4473 + (NN) 3908 + (LL) 10380
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 3877.0 ( 19.29 by residue)
QMean score : 0.001
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