Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLITYQIILFFIISLSYYLTLNHYMAVTVGNFTSIFGMFAAILFMYYYLLYKSPEYNQRKRFKHFIHITNLIIIAFSTFVLVHLALKLFFSI
1DEP Chain:? ((1-15))
----------------------------------------------------RSPDFRKAFKRLLCF--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DEP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3980 for 54 contacts (73.7/contact) +
2D Compatibility (PS) -1529 + (NN) 120 + (LL) 9208
1D Compatibility (HY) -800 + (ID) 100
Total energy: 10879.0 ( 201.46 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1DEP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DEP-query.scw
PDB file :
Tito_Scwrl_1DEP.pdb
: