Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQR----KMMLESIRYVDLVIPEKGWGQ-KEDDVEKFDVDVFVMGHDWEGEFDF----------LKDKCEVIYLKRTEG---ISTTKIKQELYGKDAK
3L92 Chain:A ((5-137))
ITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSS-----SKKPMFTLDERVALAKKVTAPLKNVEVL----GFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKE--------
General information:
TITO was launched using:
RESULT:
Template:
3L92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65971 for 799 contacts (-82.6/contact) +
2D Compatibility (PS) -12436 + (NN) -2871 + (LL) 1068
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -89310.0 ( -111.78 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_3L92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L92-query.scw
PDB file :
Tito_Scwrl_3L92.pdb
: