Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMSSASDLKAQFY-RGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVIAGDIMSYHLEEYDIL------HQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYRKW--------RPYLRHRDVYHYDLKSFEDFVIASPDDLVFDDIAFGSSQVIEQNKWQH-----------FLDQDIQNYESGRDYLPEVLTSQLSVALAYGLLDIIEIFNDLLARYDE-------DEANHEA---FIRELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEANFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTKDLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIKTYLPIFNQIDAKYLHDT-QRNESNLFEQGIELGSHYPRQMVDHQEKRTQVLATFKALD |
| 1U3D Chain:A ((16-484)) | ----VWFRRDLRVEDNPALAAAVRAGPVI-ALFVWAPEEEGHYHPGRVSRWWLKNSLAQLDSSLRS--LGTCLITKRSTDSVASLLDVVKSTGASQIFFNHL--YDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSK----CVADP--LVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFH--LVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188121 for 3506 contacts (-53.7/contact) +
2D Compatibility (PS) -45108 + (NN) -10806 + (LL) 2052
1D Compatibility (HY) -28800 + (ID) 6000
Total energy: -276783.0 ( -78.95 by residue)
QMean score : 0.385
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