Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGY---YDGITFHRVINDFMIQGGDPT-ATGMGGESIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
1H0P Chain:A ((21-164))
------------------------GRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGA-GWLSMANAGADTNGSQFFITTVK----------------------------TPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAA-----
General information:
TITO was launched using:
RESULT:
Template:
1H0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44686 for 1049 contacts (-42.6/contact) +
2D Compatibility (PS) -14789 + (NN) -7910 + (LL) 3308
1D Compatibility (HY) -10800 + (ID) 3650
Total energy: -78527.0 ( -74.86 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1H0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H0P-query.scw
PDB file :
Tito_Scwrl_1H0P.pdb
: