Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWFKLILDVTTFILIAILLFVYTYKENEEILPDTKYPIAVTDWNKKYSK-NEIYKRINQFAKNENVA-IYKSTSNYTNKNVDKDIYVFNKSKATTITPFNAKYNIHYLSDDELLKKDIKGSYFVKDKNFDVSKFINF---LKEYGVTAESYKIDHMMIAVGVIK-----QMNIEVPLS---ALLIVYFIYYIFEKNINFK-AYAIKYLN-------GFTLRKIIFENFSKKCTYWVTLIIS--QILLT-TSVLWILNYTGNLDLFILRLVLLSCLFIL----TISVINLWTFLMLLNLNIA-NMIKGKQHFKTIRFINTVCKSILLVLIASVMIENTSVIKDLNKIKETEKYWNVLD---DYYTIEFAPYHETKQSLIDNM-----LRSEQLVKASEAENNAILFKPKGDSVDNDNFSPDE-GNVILVNNQFWSIYYKQFQPDIPIKNQKNNVEVIIPQKFHAMRNEINQAYHSWFEFVQNKNNKENKLSIQFINKNDYRIFSFDARDSRHLSFIEAPIIVNVQASDLSNDFYYAMISQGGYLFKNYDALVKNIENYHLDGEISGITNYKDSVMEMYHENNLKLTVLNFSQIIIAIILIIIILFDVKYYFEQHRKLLVIKKLYGYSTLRANYQYLLINNIVVVFIGILTNVILHSQYIMMIFATILVVQILLQICSLYYHGRRFNEVIKEF |
| 5CD6 Chain:A ((2-580)) | ---------QTTGVVCEE----FDQIQLTHVLTPTGPLPTALDPNGVYPYMS--YSETSNRPVPKRYRMI-----SLENEKVKAIICPDLCGKVISLTHKESGKEVLYRPDVIKYTRILPRFYFVAG-GIEVSFPISHSPTQNEPVLYQIDHTGDRTYVTCGERESHYGMQWSVEYSLGDKDECLTQRVVYYNPGKQAYPWMSWSNAALPCAPDTQYDFPNGTVLSHASTLDTIDWKTEGTHHERDIKEMTGYFWKTKDVNAFGAYTPSL--GSGLYHIADESSTPGIKLWSYGVAGDKEWSMLSTPDRQPYVEIQGGPISDQSIKLEL-------------RPGEKKNHVEYWIPTDHPLDIYSLKVPALRLRPIDRIPLFDWARKNESSIWIALADAYKNKSTL-PAAPYPEDGQWAPSGMEDL------------------------DDAFRWAIQISPRPERDYWQFHYGTWLAGRERVEEAIEQLSIP---------------DIDLAKALLARLYVRRQAWEKARDTYAA-IPETSWLNLHPQLVIERDKVLKKFG------------TEALPEREKWLDKINASSDEWVVERKVQLLIDKKQYQEAKDLLL-----------STHFQKVH---------QTYTRTGLWEQINEGLGLSPQPVPEQLGEDRLARFEYE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54575 for 4133 contacts (-13.2/contact) +
2D Compatibility (PS) -53011 + (NN) 21577 + (LL) 10276
1D Compatibility (HY) 39200 + (ID) 1550
Total energy: -38083.0 ( -9.21 by residue)
QMean score : -0.022
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