Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGKFLKVSSLFVATLTTATLVSSPAANALSSKAMDNHPQQTQSSKQQTPKIKKGGNLKPLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV-DATHGDPHALKAFPSAINQDNYPNGG--FTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQN--ITVTGYP---GDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHW------GGVPNEFNGAVFINENVRNFLKQNIEDIHFANDDQPNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDNNNSDNPDAA |
4INK Chain:A ((4-204)) | -------------------------------------------------------------------------NSVKLITNTNVAPYSGVTWMGA--------GTGFVVGNHTIITNKHVTYHMKVGDE--IKAHPNGF----YNNGGGLYKVTKIVDYPGKEDIAVVQVE-EKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNK--LQMYESTGKVLSVNGNIVTSDAVVQPGSSGSPILNSKREAIGVMYASDKPTGESTRSF--AVYFSPEIKKFIADNLD--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57527 for 1577 contacts (-36.5/contact) +
2D Compatibility (PS) -19921 + (NN) -6241 + (LL) 220
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -99219.0 ( -62.92 by residue)
QMean score : 0.435
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