Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSRKTYEKIANINGMFNMLEQQIIH-SQDMAHFRSEFF-----YVNHEHRENYEALLIYYKNSIDNPIVDGACYILAL---PEIFNSVDVFESELPFSWVYDENGITETMKSLSIPLQY---LVAAALEVTDVNIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL-------------------------------------------------------- |
3K9D Chain:A ((3-456)) | LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFD-----NGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETK--VGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVLELEDIR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52601 for 1029 contacts (-51.1/contact) +
2D Compatibility (PS) -16059 + (NN) -8181 + (LL) 664
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -78477.0 ( -76.27 by residue)
QMean score : 0.118
|
|
|