Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKGRLNNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVVRNIASGSITKRLGFENGEVFREPLVEFFYKNDALNDPLITDDHVKLLNIASDEDIEILKSKALKINNVLKQLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGSLIETYQIFLNKLEDLK
4O86 Chain:A ((12-225))
--------AKKMIPID-DDKLIMEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLGISLDE-IKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYK----------
General information:
TITO was launched using:
RESULT:
Template:
4O86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52729 for 1607 contacts (-32.8/contact) +
2D Compatibility (PS) -22834 + (NN) -5675 + (LL) 1684
1D Compatibility (HY) -24800 + (ID) 5100
Total energy: -109454.0 ( -68.11 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_4O86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O86-query.scw
PDB file :
Tito_Scwrl_4O86.pdb
: