Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
4E1A Chain:A ((2-157))
---TGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAG-VDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN
General information:
TITO was launched using:
RESULT:
Template:
4E1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101131 for 1226 contacts (-82.5/contact) +
2D Compatibility (PS) -17063 + (NN) -7959 + (LL) 460
1D Compatibility (HY) -17600 + (ID) 3450
Total energy: -146743.0 ( -119.69 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_4E1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E1A-query.scw
PDB file :
Tito_Scwrl_4E1A.pdb
: