Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWIHLLCTMIKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIWILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGCFFIGQLTVIYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVIIFLILAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPDIWKGLLFIEVLLATVIVLRVFIGYLHFFLKKENQDKFLRNASQ- |
| 3RVY Chain:A ((19-239)) | MYLRITNIVES------------------------SFFTKFIIYLIVLNGITMGLETSKTFMQSF-------------------------GVYTTLFNQIVITIFTIEIILRIYVHRISFFKD--------PWSLFDFFVVAISLVPTSSG-----------------FEILRVLRVLRLFRLVTAVPQ------------MRKIVSALISVIPGMLSVIALMTLFFYIFAIMAT-QLFGERFPEWFG--------TLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159795 for 1427 contacts (-112.0/contact) +
2D Compatibility (PS) -21975 + (NN) -1842 + (LL) 6504
1D Compatibility (HY) -21200 + (ID) 1700
Total energy: -200008.0 ( -140.16 by residue)
QMean score : 0.271
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