Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSL-TLEQI-------KELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
3MQK Chain:A ((40-253)) | ---GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHL--------------------HGDVPEDKIIQVMKEFEGEIIQRPPLRSAV--------------------KRRLRTRKVYYIEVLEIEGRDVLFRVGVEA--GTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAV------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139420 for 1496 contacts (-93.2/contact) +
2D Compatibility (PS) -21658 + (NN) -4070 + (LL) 5308
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -179540.0 ( -120.01 by residue)
QMean score : 0.469
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