Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRELIKSLGIRR
1IBM Chain:O ((2-88))
-PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIR-
General information:
TITO was launched using:
RESULT:
Template:
1IBM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19163 for 530 contacts (-36.2/contact) +
2D Compatibility (PS) -9383 + (NN) -4422 + (LL) 308
1D Compatibility (HY) -8800 + (ID) 2500
Total energy: -43960.0 ( -82.94 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_1IBM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBM-query.scw
PDB file :
Tito_Scwrl_1IBM.pdb
: