Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
4ODG Chain:A ((9-141)) | ---------------------------------------------KEPATLIKAIDGDTIKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMIENAKKIEIEFDKGQRTDKYGRGLAYIY-ADGKMINEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ODG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 255 for 1023 contacts (0.2/contact) +
2D Compatibility (PS) -14165 + (NN) -7559 + (LL) 3588
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -29631.0 ( -28.96 by residue)
QMean score : 0.468
|
|
|