Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
4TNJ Chain:T ((1-32)) | --------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRITKK-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5605 for 112 contacts (-50.0/contact) +
2D Compatibility (PS) -3547 + (NN) -3563 + (LL) 13772
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -2793.0 ( -24.94 by residue)
QMean score : -0.250
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