Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWLVIMIIHNKARFLCCSKLLEKFYSFLVTRIKKRGIFFIK
2QDQ Chain:A ((2496-2529))
-GGIAQIIAAQEEMLRKERELEEARKKLAQIRQQQ------
General information:
TITO was launched using:
RESULT:
Template:
2QDQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3417 for 127 contacts (-26.9/contact) +
2D Compatibility (PS) -3569 + (NN) -3268 + (LL) 772
1D Compatibility (HY) 2000 + (ID) 300
Total energy: -7782.0 ( -61.28 by residue)
QMean score : 0.073
(partial model without unconserved sides chains):
PDB file :
Tito_2QDQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QDQ-query.scw
PDB file :
Tito_Scwrl_2QDQ.pdb
: