Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
2JG6 Chain:A ((1-186))
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
General information:
TITO was launched using:
RESULT:
Template:
2JG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85171 for 1437 contacts (-59.3/contact) +
2D Compatibility (PS) -19793 + (NN) -9999 + (LL) 0
1D Compatibility (HY) -26000 + (ID) 9300
Total energy: -150263.0 ( -104.57 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_2JG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JG6-query.scw
PDB file :
Tito_Scwrl_2JG6.pdb
: