Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKL------FDEFRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQIIVKPLDEIYAD
4UVC Chain:A ((469-550))
--VNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILD------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14289 for 342 contacts (41.8/contact) +
2D Compatibility (PS) -8329 + (NN) -4459 + (LL) 3604
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 2155.0 ( 6.30 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_4UVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UVC-query.scw
PDB file :
Tito_Scwrl_4UVC.pdb
: