Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGT----KVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQ--------------SYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD---- |
| 1JM6 Chain:A ((11-374)) | ---------ASLAGAPKYIEHFSKFSPSPLSMKQFLD--FGACEKTSFTFLRQELPVRLANIMKEINLLPDRVLST-----------PSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVP-TMAQGVLEYDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDPKHIGSIDPNCSVSDVVK-DAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY------VPSHLYHMLFELFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83897 for 2494 contacts (-33.6/contact) +
2D Compatibility (PS) -33469 + (NN) -7732 + (LL) 3228
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -131170.0 ( -52.59 by residue)
QMean score : 0.235
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