Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFD-GKVDIDN-------------ADNIGFLIEHPKLYDNKSGLYNLKLFAQVLGKGF---DKAYTDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLTTIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDKADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK |
| 3C4J Chain:A ((27-263)) | --VHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLN-LLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEE-----GKPED----LFDRPQHERTKAFLSKVF--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120977 for 1803 contacts (-67.1/contact) +
2D Compatibility (PS) -23321 + (NN) -5384 + (LL) 5284
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -163498.0 ( -90.68 by residue)
QMean score : 0.529
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