Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHNELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTLAQNKWLVGAIWALVTIVMIAVITASITALLP |
3I04 Chain:M ((448-500)) | ---VAKMKEEFPAIVDRVQ-VTIFTDEA---------KVKEYMEVAREKYKERDDRMRGLTDETVD---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5531 for 208 contacts (26.6/contact) +
2D Compatibility (PS) -5671 + (NN) -1226 + (LL) 7328
1D Compatibility (HY) -3200 + (ID) 850
Total energy: 1912.0 ( 9.19 by residue)
QMean score : 0.463
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