Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNIS----EVDAEVDLDGISES-TEKTVKINLPEHVTK--AQPSETKAYINVK |
2KQ1 Chain:A ((11-95)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGELELTVL---YDEERYDIV-EQTETVQVDLEGPRGVLTVFRFARPSYEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12169 for 455 contacts (26.7/contact) +
2D Compatibility (PS) -7927 + (NN) 3103 + (LL) 15192
1D Compatibility (HY) -1600 + (ID) 550
Total energy: 20387.0 ( 44.81 by residue)
QMean score : 0.442
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