Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSK-LYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQ-----IRWNGFYWAGANYKN-FKTRTFKSTYEIDWENHKVKLLDTKETENNK |
4IYC Chain:A ((12-288)) | ----------------------------------IENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGN--FNSGP---GNGSFNYSKTISYNQQNYISEV-EHQNSKSVQWGIKANSFITS----LGKMSGHDP---NLFVGYKPYSQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRT---GNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43532 for 2077 contacts (-21.0/contact) +
2D Compatibility (PS) -27750 + (NN) -9430 + (LL) 2840
1D Compatibility (HY) -20400 + (ID) 4350
Total energy: -102622.0 ( -49.41 by residue)
QMean score : 0.345
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