Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQYAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPGR-IYLSVDAY--GE--DIKVNGWEEDTELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLNVHAAIIGKAAHQASFWEGLE
1H5Y Chain:A ((5-206))
-LRIIPCLDIDGGAKVVVKGVNFQGIREVGDPVEMAVRY--EEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGG----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H5Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98445 for 1595 contacts (-61.7/contact) +
2D Compatibility (PS) -21559 + (NN) -9501 + (LL) 3488
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -140217.0 ( -87.91 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1H5Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H5Y-query.scw
PDB file :
Tito_Scwrl_1H5Y.pdb
: