Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIAKSKIKTKTKCYRA
1F02 Chain:T ((271-336))
-MDQAANAAESATKDQLTQEAFKNPENQKVNIDANGNAIPSGELK--------------------DDIVEQIAQQAKEAGEVARQQA
General information:
TITO was launched using:
RESULT:
Template:
1F02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2584 for 378 contacts (-6.8/contact) +
2D Compatibility (PS) -6909 + (NN) -867 + (LL) 2296
1D Compatibility (HY) 6000 + (ID) 500
Total energy: -2564.0 ( -6.78 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_1F02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F02-query.scw
PDB file :
Tito_Scwrl_1F02.pdb
: