Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKFVRNVVLFILTAIFLAFMLLVSYCMPHYSVAVISGVEVKRMNENENTPNNKEVKTLARDVYFVQTYDPKDQKSVTVYRNEDTRFGFPFYFKFNSADISALAQSLVNQQVEVQYYGWRINLFNMFPNVIFLKPLKESDEMSKPVFSWILYALLLVGFFISARSVCTLFKGKAH |
1HF9 Chain:A ((1-41)) | ---------------------------------------ALKKHHENEISHHAKEIERLQKEIERHKQSIKKLKQSEDDD----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8856 for 159 contacts (55.7/contact) +
2D Compatibility (PS) -4001 + (NN) 3561 + (LL) 12020
1D Compatibility (HY) 1600 + (ID) 450
Total energy: 21586.0 ( 135.76 by residue)
QMean score : 0.046
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