Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQSHLEREVHIVNIAIYQQDNNPIASVSIAAKLLNENKLVYEKRYKIVLSYLFDTPDFDYASMPKNPTGFKITRYSITEIAPTNRND |
| 2GQA Chain:A ((245-285)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DADPILTYTAAAALLNKHRIVY-----------LHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -862 for 165 contacts (-5.2/contact) +
2D Compatibility (PS) -4580 + (NN) -5024 + (LL) 17520
1D Compatibility (HY) -3600 + (ID) 750
Total energy: 2704.0 ( 16.39 by residue)
QMean score : 0.596
|
|
|