Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNVEYHFKRKDNLALITELLNLDLFP--------IKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI |
| 3S5J Chain:B ((63-125)) | --------------------------------------------------INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKEDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20913 for 302 contacts (-69.2/contact) +
2D Compatibility (PS) -5714 + (NN) -927 + (LL) 3620
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -25684.0 ( -85.05 by residue)
QMean score : 0.339
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