Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQTKEEWGGFDELEIRYSDKALANTNTLDIKDTQMISIALEEVEEVEVKVCCVDSQSIKVGLFKDGQL-IYESEVEKL
2JPP Chain:A ((16-47))
--------------------------------------------DDITITILGVSGQQVRIGINAPKDVAVHREEIYQR
General information:
TITO was launched using:
RESULT:
Template:
2JPP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8999 for 107 contacts (-84.1/contact) +
2D Compatibility (PS) -3485 + (NN) -460 + (LL) 3572
1D Compatibility (HY) -3200 + (ID) 200
Total energy: -12772.0 ( -119.36 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_2JPP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JPP-query.scw
PDB file :
Tito_Scwrl_2JPP.pdb
: