Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEWKTDTEEVKKVVGRCREFKRSLQEEKCSPFIKDLDSYALKIIVERRKTEMQLEKAIGELKKAKSNEDDAKVALRVLQGASVVSWIWPPARIAATAAIVAAEAVLKFMKEDTEKCKRNVELLERMLEIYSNQAKASANLMNQAWEGIKKRLHFYTDKHQEFIRRLKQASDAIDNEYNFPTPGVLLEYDFERPAISYTPKKSVFNERLKDLRENFSASLYADLKDKIHHNALSNDDLERMIAFREQEFEKSLEDWMGAYSYDENPNDELDRMAISKEQELEKSLEDLMPSVLGVPSYNESLTLAKNRCVKNFKEALEGFTEKIKESPNDS-NAINEAFDNLETELERATENLSQKIDPVLERNENYTQKALEYREFLESRKESFIVDEKNPYPEEVSFNEWRWAEFDSVFSAIVPLEDLNKTACAHHALKALQATLKDNDLGFDATELEQIAKGFIPRGYLWHFDANVLGNLALVREELLLGVKHTKGYSLWTEFLQKQN |
| 4GNT Chain:A ((27-98)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMKAVTEQGHELSNEERNLLSVAYKNV-VGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLILNATQAESKVFYLKMKGDYFRYLSEVASGENKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15700 for 368 contacts (42.7/contact) +
2D Compatibility (PS) -7633 + (NN) -3699 + (LL) 24664
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: 26782.0 ( 72.78 by residue)
QMean score : 0.302
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