Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHL-TSFYGPATGLLFGFTYLYAAINHTFGLDWRPY-SWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTP-----WLAIIEGILTAWIPAWLLFIQHWV-
4FZS Chain:A ((7-215))
SDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWA--NKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEA
General information:
TITO was launched using:
RESULT:
Template:
4FZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123424 for 1149 contacts (-107.4/contact) +
2D Compatibility (PS) -19032 + (NN) 2642 + (LL) 384
1D Compatibility (HY) 3200 + (ID) 1000
Total energy: -137230.0 ( -119.43 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_4FZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FZS-query.scw
PDB file :
Tito_Scwrl_4FZS.pdb
: