Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHKSAEKRIRQTIKRTERNRFYKTKVKNIIKAVREAVAINDVAKAQERLKIANKE---LHKFVSKGILKKNTASRKVSRLNASVKKIALA
3T1H Chain:T ((11-91))
-----SALKRHRQSLKRRLRNKAKKSAIKTLSK---KAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
3T1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6674 for 474 contacts (14.1/contact) +
2D Compatibility (PS) -8261 + (NN) -3125 + (LL) 816
1D Compatibility (HY) -1200 + (ID) 1600
Total energy: -6696.0 ( -14.13 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3T1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T1H-query.scw
PDB file :
Tito_Scwrl_3T1H.pdb
: