Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKIVLV----------AIALLISGCASYKIT---------PEHVTSYNNGIQVMTSTQAR----------------------------SKVQLEIAQSKLKGLNESPLVLYVAAQVLEGKPVVFSRKAISVSIN---QTNLPVLSL-----RQVMKSSFDFEGILQSFNISVPTAPID--NINMIT-PPMFYYGQ-------GSFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQES------RQAL--------KILAINYLKKNTLNVENKAKGG-----FVVVDTKNLKTPGVVV--VKVFLEDEIHTFKI-DISKM |
| 4QTZ Chain:A ((1-321)) | LGNVVCVTGASGYIASWLVRLLLHRGYTVKATVRDPNDPKKVDHLVKLDGAKERLQLFKANLLEEGAFDSVVQGCHGVFHTASPFYHDVKDPQAELIDPALKGTLN---VLNSCAKSPSLKRVVLTSSIAAVAYNGKPRTPDVVVDETWFTDADFCAKSNLWYVVSKTLAEEAAWKFVKENNIDMVTINPAMVIGPLLQPVLNTSAAAILNLINGAQTFPNASFGWVNVKDVANAHILAYENASASGRHCLVERVAHYSEVVRILRELYPSLQLPEKCADDKPYVPIYQVSKEKAKSLGLEYTPLEVSIKETVESLKEKKFANL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92836 for 1640 contacts (-56.6/contact) +
2D Compatibility (PS) -25313 + (NN) -6014 + (LL) 8
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -139705.0 ( -85.19 by residue)
QMean score : 0.224
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