Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNMNTHTRGIDSGLIHSLQSISLSMFRKGFFGLYQGSISARIGA--NQFVINKRNAVFDQLNENTLLVLHDKI-DYR----WKEASLDSPIHASVYREFLDAKFIAYARPPYSLAYSLRHNRLLPRDYLGYRSLGEEIAIFNPKDYDSWQERADTEILRQLQESKKYFVFIKGCGIFAYHRELSKLMEVFDLIENSCKVLRLGDLMDYCYNDDPRLSV
3OCR Chain:A ((25-226))
-----DRVSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTGLGINYAGYVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDGLLPISQHSIAFSG-RVAYHGYEGIALD-LSERERLVADLGD--KSVMILRNHGLLTGGVSVEHAIQQLHALEYACNIQIAAQSAGNAELVFPPREV
General information:
TITO was launched using:
RESULT:
Template:
3OCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127273 for 1550 contacts (-82.1/contact) +
2D Compatibility (PS) -20394 + (NN) -3538 + (LL) 692
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -154613.0 ( -99.75 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3OCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OCR-query.scw
PDB file :
Tito_Scwrl_3OCR.pdb
: