Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRRLLLNLFCMVFLQACLKPMSDPKAEKVD----SQVQCGFGSKDC
1DUN Chain:A ((102-120))
----------------LIILQHHSNSRQPWDENKI------------
General information:
TITO was launched using:
RESULT:
Template:
1DUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 0 for 30 contacts (0.0/contact) +
2D Compatibility (PS) -1459 + (NN) 2305 + (LL) 2388
1D Compatibility (HY) -800 + (ID) 50
Total energy: 2384.0 ( 79.47 by residue)
QMean score : 0.068
(partial model without unconserved sides chains):
PDB file :
Tito_1DUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DUN-query.scw
PDB file :
Tito_Scwrl_1DUN.pdb
: