Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKPPFVVFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS |
| 2NVU Chain:A ((110-147)) | ---------------------------------------------------------------------------------------------------------SPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5136 for 187 contacts (-27.5/contact) +
2D Compatibility (PS) -3804 + (NN) 1735 + (LL) 8700
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -2755.0 ( -14.73 by residue)
QMean score : 0.437
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