Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKMQAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYFYQAVNEKRCILTDPYPSKKG-NHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER |
3LIC Chain:A ((53-176)) | ----------------------------------NNPEKLKTVLTNRIQRNPDFFGSAIAFKPNTFPNKKLFSPYVYRSGSGF-NYLD-IGADGYDYTDGNWDWWSKAINQVGGYWSKAYFDEGAGNVLMITYAVPFGV-QPDYFGVTTVDLALDRLPEQLGIAPSRLVVLDDQGRLIFHSDKEKVLAGWLDKQNIKNIAFATLLNDGQAGQASFVDDKGTVYLASVAEVAKLKWRVVVMVPKHELFASL--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41909 for 909 contacts (-46.1/contact) +
2D Compatibility (PS) -13209 + (NN) -307 + (LL) 10024
1D Compatibility (HY) 1600 + (ID) 650
Total energy: -44451.0 ( -48.90 by residue)
QMean score : 0.185
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