Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFYK----RVLKLHHFRNLGKNSPTKLLLNS-SFDEKHGGLVVLVGENNVGKSNVLEALKIFNDADIKLCSEEDYFKDHEKDTLLSLEE
3CNO Chain:A ((68-120))
VEFFKKQGKRVITTH------KGEPRKVLLKKLSFDRL--ARVLIVGVPNTGKSTIINKLKGKRAGIQWFSLENGVKILDTPGILYKNIF
General information:
TITO was launched using:
RESULT:
Template:
3CNO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6895 for 197 contacts (-35.0/contact) +
2D Compatibility (PS) -5188 + (NN) -2738 + (LL) 72
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -21099.0 ( -107.10 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3CNO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CNO-query.scw
PDB file :
Tito_Scwrl_3CNO.pdb
: