Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MLEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSLFGARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGN----LLKFIPQSVMYGFVNALGILLLTEQFKFL-------QNQNLGVFVLLAIGILIIYLFPLITKKIPS-NLICILAVSAIALIFDTHAPNLGSIEQGVSGFHFIIIPKNLDFKMVLGLLPYALSLALVGTIESLLTAKTLDVILKDGVSDK---NKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAVVAVMVIISFTTFNFQSIMNIKTIK-----LYDTLNMLLVVAVVLYTH-------------NLAIGVVVGVLINALWIKFKGMG |
3QE7 Chain:A ((4-410)) | RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPV------LFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINA----HWFALPTLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTY--GENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLIS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -333999 for 3156 contacts (-105.8/contact) +
2D Compatibility (PS) -37558 + (NN) -9873 + (LL) 512
1D Compatibility (HY) -20000 + (ID) 2700
Total energy: -403618.0 ( -127.89 by residue)
QMean score : 0.306
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