Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHF--SLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYPNACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCLESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL
2J41 Chain:A ((4-186))---EKGLLIVLSGPSGVGKGTVRKRIFED-PSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPS---------------------------KEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAK-----------


General information:
TITO was launched using:
RESULT:

Template: 2J41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70067 for 1096 contacts (-63.9/contact) +
2D Compatibility (PS) -16947 + (NN) -8189 + (LL) 3940
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -108263.0 ( -98.78 by residue)
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_2J41.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J41-query.scw
PDB file : Tito_Scwrl_2J41.pdb: