Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNFQYSTL--ENIPKAFDILKDPPKKLYCVGDIKLLEA--PLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENALPK-TIMLSPCSLDFIYPTNNHKVIQEIAQN-GLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLN--ESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLK--EMPEMKDEFLEYCAKN-PSYEEAYLKFG-------DKLLEYELLGKIKRINHLVVLA |
| 3MAJ Chain:A ((87-381)) | --IGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVMARPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSGTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQG-ATLITSASDIVEAVASILE--GEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114316 for 2232 contacts (-51.2/contact) +
2D Compatibility (PS) -28260 + (NN) -7626 + (LL) 632
1D Compatibility (HY) -7600 + (ID) 3250
Total energy: -160420.0 ( -71.87 by residue)
QMean score : 0.492
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