Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSM-KPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSETNSKKSRNKELQALLSGVSVDMMVFLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIKEVVYSEKERTKEILEMLEEQRRGKVGDIMKIEEE |
3HM4 Chain:A ((4-109)) | -----------------------------------------------------SSGIEIAKPFVTATTNVLSTMAGIQPIPGQPYVKKNN-------VAKGDVSAVVGITGHKNGSISVTFTKQCAIAVVKAMLGDDI------QDIIQDTKDAVGEVTNMISGQARAALSEMGMTFQGATPSVIMGDGHTISHVTKSPVIAIPFKTNHGEFTVEFCLE---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53705 for 663 contacts (-81.0/contact) +
2D Compatibility (PS) -11120 + (NN) -1598 + (LL) 16624
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -51499.0 ( -77.68 by residue)
QMean score : 0.336
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