Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTR--YDG---MSFNAFKEYKKRVFAK-NEKKNIAFSSINVIPYPNSQNKRLFYVVFDQ---DYKAYQQNKLSYSSNSQKELYVEIENNQASIIMEK |
| 3GZR Chain:A ((4-124)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTDAIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAP----GSALAVVTLIQDAYVTP-DGRQMPRAHDRLTLLAVEREGVWRFIHGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43815 for 708 contacts (-61.9/contact) +
2D Compatibility (PS) -12071 + (NN) -4018 + (LL) 13396
1D Compatibility (HY) 0 + (ID) 600
Total energy: -47108.0 ( -66.54 by residue)
QMean score : 0.524
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