Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILEVAFSI-SNDVHLVLHHQQERIKEAVSKRFKGVIFHAQIVEKYSGTGGAIMQENKTPIPTQHERVLILNADMPLITKDALTPLLESH-NNAIGLL--HLADPKGYGRVILENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAI----FLEEECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYLE------KGVSFKGECVLEQGVRL-----IGN-CLIENA------RIKAYSVIEESQI-INSSVGPFAHARPKS-VICDSHVGNFVETKNAKL-QGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
| 4KPX Chain:A ((6-453)) | -LSAVILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANEQVNWVLQTEQL----GTAHAVQQ--AAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPENGIALLTVNLDNPTGYGRIIRENGNVVAIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVE---GANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDVGENELVITRVAQRHIQ-GWQRPI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270190 for 3345 contacts (-80.8/contact) +
2D Compatibility (PS) -45758 + (NN) -13902 + (LL) 736
1D Compatibility (HY) -36800 + (ID) 8900
Total energy: -374814.0 ( -112.05 by residue)
QMean score : 0.500
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