Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRSLAFCLLALLGLQVLGARDFSQLKNEELLKLAGTLPSNEAIDYRMEVSKRLKALSAEDAKKFRANFSRIARKNL-SKMSEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSPK |
3M1M Chain:A ((187-245)) | ---------------------------------------------------KSLLRFLAEKGKRLGITLSKTAKEWLEG-----------EELRKELVKRDSGKPVEKIKEEICTKSPPKLIKEIICENKTYADVNIDRSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8174 for 190 contacts (43.0/contact) +
2D Compatibility (PS) -5094 + (NN) -2042 + (LL) 5348
1D Compatibility (HY) -2400 + (ID) 900
Total energy: 3086.0 ( 16.24 by residue)
QMean score : 0.842
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