Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKARGFKTKMRGFKIFSGSAHPAFGKEVSKHLGFPLSKAVIGKFSDGEINIQISESVRGKDIFIIQPTCVPVNDNLMELLVMVDALRRSSANSITAVLPYFGYARQDRKAAPRVPITAKMVANLMQEVGIERIITMDLHAGQIQGFFDVPVDNLYGSIV--FRDYIRSKALKNPIIASPDVGGVTRARYFANQMGLDLIIVDKRREKANESEVMNIIGSAKERDVILVDDMIDTAGTICKAALALKEQGATSVMALGTHAVLSGNAIKRIKESALDEVVVTNSIPLVQKCDKITTLSVASLFAEVIRRIYHNESVQSLFT |
1U9Z Chain:A ((3-284)) | --------------VVSGSQSQNLAFKVAKLLNTKLTRVEYKRFPDNEIYVRIVDEINDDEAVIIN-TQKNQNDAIVETILLCDALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIYSNI-VDKLITINPHETHIKDFFTIPF--IYGDAVPKLAEYVKDK-LNDPIVLAPDKGALEFAKTASKILNAEYDYLE----------IAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDTY-----LSEVSKVSVAEVIVDLL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279950 for 2343 contacts (-119.5/contact) +
2D Compatibility (PS) -29481 + (NN) -13272 + (LL) 2932
1D Compatibility (HY) -23200 + (ID) 4350
Total energy: -347321.0 ( -148.24 by residue)
QMean score : 0.559
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